BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026G03SP1|AL428601
(852 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1480 1664 0.0
>3x_Contig1480
Length = 8659
Score = 1664 bits (837), Expect = 0.0
Identities = 848/853 (99%), Gaps = 1/853 (0%)
Strand = Plus / Minus
Query: 1 gatcaacagagatgttcattaggttggaacgctttaagtcctttgcattcttcacggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4894 gatcaacagagatgttcattaggttggaacgctttaagtcctttgcattcttcacggtta 4835
Query: 61 gctccaacacaccaattgacaatgcggaaccagacactaattgtggaatattcaattgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4834 gctccaacacaccaattgacaatgcggaaccagacactaattgtggaatattcaattgaa 4775
Query: 121 gcgagaaaggtggcaaaaacaatgggcctagatactttctggctagttctcttgctaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4774 gcgagaaaggtggcaaaaacaatgggcctagatactttctggctagttctcttgctaaag 4715
Query: 181 gtagaagacctggaatactcataatttcccagttgaaaacggtattacctaatagcttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4714 gtagaagacctggaatactcataatttcccagttgaaaacggtattacctaatagcttgc 4655
Query: 241 aaacaaaatcgatatcaggaacgtccaaaaactgaatgttgacggtttcgatatgaggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4654 aaacaaaatcgatatcaggaacgtccaaaaactgaatgttgacggtttcgatatgaggga 4595
Query: 301 aaggtgtcattagcttcatacgaaccctaacacgagctttgaaagcgatatctgctacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4594 aaggtgtcattagcttcatacgaaccctaacacgagctttgaaagcgatatctgctacaa 4535
Query: 361 ccactggtacagttaaaccgaaaagtttcgccttaaggacaacggtttgattcacatagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4534 ccactggtacagttaaaccgaaaagtttcgccttaaggacaacggtttgattcacatagt 4475
Query: 421 tacgtaattgtttggaagtcaaatcagacaaatcgtgtggagtgaacgacatcccaaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4474 tacgtaattgtttggaagtcaaatcagacaaatcgtgtggagtgaacgacatcccaaaat 4415
Query: 481 ccatgacgacaacatccaattcagtgttttggaaagtctttaccaagtcaattcttggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4414 ccatgacgacaacatccaattcagtgttttggaaagtctttaccaagtcaattcttggtg 4355
Query: 541 gttttatacccaatgtgaaacgatctatccacagtgcttttacgaaggctgggatcgctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4354 gttttatacccaatgtgaaacgatctatccacagtgcttttacgaaggctgggatcgctt 4295
Query: 601 cgttaacagcaatttgttcgttaacctgttccacaacaatttgagacaccgacggttcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4294 cgttaacagcaatttgttcgttaacctgttccacaacaatttgagacaccgacggttcaa 4235
Query: 661 ttattggccagtacttgtccaagaaactgttcaaccattccattgactcataatcatctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4234 ttattggccagtacttgtccaagaaactgttcaaccattccattgactcataatcatctt 4175
Query: 721 ccaccttttggacaacaaactctttttgagcaagttctctaattgacattctatatttww 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4174 ccaccttttggacaacaaactctttttgagcaagttctctaattgacattctatattttt 4115
Query: 781 daactgaggtcctatagaacacagctgtagcaagaataatgaagaatacagg-mctaacg 839
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4114 taactgaggtcctatagaacacagctgtagcaagaataatgaagaatacaggacctaacg 4055
Query: 840 agaacttaaattt 852
|||||||||||||
Sbjct: 4054 agaacttaaattt 4042
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5736
Number of Sequences: 1807
Number of extensions: 5736
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 852
length of database: 10,358,551
effective HSP length: 16
effective length of query: 836
effective length of database: 10,329,639
effective search space: 8635578204
effective search space used: 8635578204
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)